Structure of PDB 4cja Chain A Binding Site BS01

Receptor Information
>4cja Chain A (length=753) Species: 412963 (Mycetohabitans rhizoxinica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LNLSPLERSKIEKQYGGATTLAFISNKQQELAQILSRADILKIASYDCAA
HALQAVLDCGPMLGKRGFSQSDIVKIAGNIGGAQALQAVLDLESMLGKRG
FSRDDIAKMAGNIGGAQTLQAVLDLESAFRERGFSQADIVKIAGNNGGAQ
ALYSVLDVEPTLGKRGFSRADIVKIAGNTGGAQALHTVLDLEPALGKRGF
SRIDIVKIAANNGGAQALHAVLDLGPTLRECGFSQATIAKIAGNIGGAQA
LQMVLDLGPALGKRGFSQATIAKIAGNIGGAQALQTVLDLEPALCERGFS
QATIAKMAGNNGGAQALQTVLDLEPALRKRDFRQADIIKIAGNDGGAQAL
QAVIEHGPTLRQHGFNLADIVKMAGNIGGAQALQAVLDLKPVLDEHGFSQ
PDIVKMAGNIGGAQALQAVLSLGPALRERGFSQPDIVKIAGNTGGAQALQ
AVLDLELTLVEHGFSQPDIVRITGNRGGAQALQAVLALELTLRERGFSQP
DIVKIAGNSGGAQALQAVLDLELTFRERGFSQADIVKIAGNDGGTQALHA
VLDLERMLGDRGFSRADIVNVAGNNGGAQALKAVLEHEATLNERGFSRAD
IVKIAGNGGGAQALKAVLEHEATLDERGFSRADIVRIAGNGGGAQALKAV
LEHGPTLNERGFNLTDIVEMAANSGGAQALKAVLEHGPTLRQRGLSLIDI
VEIASNGGAQALKAVLKYGPVLMQAGRSNEEIVHVAARRGGAGRIRKMVA
PLL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4cja Bud, a Helix-Loop-Helix DNA-Binding Domain for Genome Modification
Resolution2.651 Å
Binding residue
(original residue number in PDB)		Y29 D61 C62 H65 I94 G95 Q98 Q164 T193 G194 Q197 G227 Q230 I259 I292 Q296 N325 G326 Q329 Q362 I391 Q395 I424 G425 Q428 T457 G458 Q461 Q494 S523 G524 Q527 D556 G557 Q560 N589 G590 Q593 G622 G655 Q659 S688 G689 Q692 Q724 R753
Binding residue
(residue number reindexed from 1)		Y15 D47 C48 H51 I80 G81 Q84 Q150 T179 G180 Q183 G213 Q216 I245 I278 Q282 N311 G312 Q315 Q348 I377 Q381 I410 G411 Q414 T443 G444 Q447 Q480 S509 G510 Q513 D542 G543 Q546 N575 G576 Q579 G608 G641 Q645 S674 G675 Q678 Q710 R739
Binding affinityPDBbind-CN: Kd=25nM
External links