Structure of PDB 4cdz Chain A Binding Site BS01

Receptor Information
>4cdz Chain A (length=193) Species: 60894 (Saccharopolyspora spinosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PSQNALYLDLLKKVLTNTIYAHTMIGLERLDNLQHCVEAVLADGVPGDFA
ETGVWRGGACIFMRAVLQAFGDTGRTVWVVDSFVSLETVRQNFARYGLLD
EQVRFLPGWFRDTLPTAPIQELAVLRLDGDLYESTMDSLRNLYPKLSPGG
FVIIDDYFLPSCQDAVKGFRAELGITEPIHDIDGTGAYWRRSW
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain4cdz Chain A Residue 1251 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4cdz Crystal Structure and Functional Insights of Spinosyn Rhamnosyl 4'-O-Methyltransferase Spnh from Saccharopolyspora Spinosa
Resolution2.503 Å
Binding residue
(original residue number in PDB)
D185 D212 D213
Binding residue
(residue number reindexed from 1)
D128 D155 D156
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0032259 methylation

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Molecular Function

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Biological Process
External links
PDB RCSB:4cdz, PDBe:4cdz, PDBj:4cdz
PDBsum4cdz
PubMed
UniProtQ9ALM9

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