Structure of PDB 4bes Chain A Binding Site BS01
Receptor Information
>4bes Chain A (length=469) Species:
272624
(Legionella pneumophila subsp. pneumophila str. Philadelphia 1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PNLPGLYFLQAYPSEEIWRLFVDGRFWSKENGWRGYESREPGCLNAALES
LCSIALQVEKSGEEFELSVDLIKRIHKKCGPGELRTDEPVSFGIPAGRAS
IKGIEEFLSLVFLTEGGAEFGPGKAGPFGPRFDKNYFKNLNPEQIPDLAK
QIYFDMCKYGHSNTNHFYLAVMKNVDVYLEKITQSYNKEIKTAETLDEKL
KIIVKHIRMYEVLHPFRDANGRTFVNNLLNIPLMQQGLPPATFYEPNVFD
LYSAEELVVVVKEAIFNTVEIIEQSKRKTPITLYGYHSSLEEQTKFRDML
DSPSYEKIKHMDFSDLNPEKLHLKTQKCLSSLNEQYPLHRGAIYLSDPGE
IKLLLSNRNESQINQQIEQGAPPIYVGKTPAHLAVISGNMAMLDELIAKK
ADLSLQDYDGKTALHYAAECGNMQIMGKILKVVLSQEDAIKVLNIKDNHG
KTAFHYAAEFGTPELISAL
Ligand information
Ligand ID
C5P
InChI
InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey
IERHLVCPSMICTF-XVFCMESISA-N
SMILES
Software
SMILES
CACTVS 3.341
NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)O)O)O
CACTVS 3.341
NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O
ACDLabs 10.04
O=C1N=C(N)C=CN1C2OC(C(O)C2O)COP(=O)(O)O
Formula
C9 H14 N3 O8 P
Name
CYTIDINE-5'-MONOPHOSPHATE
ChEMBL
CHEMBL307679
DrugBank
DB03403
ZINC
ZINC000003861744
PDB chain
4bes Chain A Residue 1000 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4bes
Structure of the Legionella Effector Ankx Reveals the Mechanism of Phosphocholine Transfer by the Fic Domain.
Resolution
2.54 Å
Binding residue
(original residue number in PDB)
D28 F31 Y41 R44 A234 N235 G236 R237 N262
Binding residue
(residue number reindexed from 1)
D23 F26 Y36 R39 A219 N220 G221 R222 N247
Annotation score
3
Enzymatic activity
Enzyme Commision number
2.7.1.-
External links
PDB
RCSB:4bes
,
PDBe:4bes
,
PDBj:4bes
PDBsum
4bes
PubMed
23572077
UniProt
Q5ZXN6
|ANKX_LEGPH Phosphocholine transferase AnkX (Gene Name=ankX)
[
Back to BioLiP
]