Structure of PDB 4bea Chain A Binding Site BS01
Receptor Information
>4bea Chain A (length=181) Species:
9606
(Homo sapiens) [
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PEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQ
LSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFW
LETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIG
RVYKERLGLPPKIVIGYQSHADTATKNRFVV
Ligand information
>4bea Chain B (length=12) Species:
32630
(synthetic construct) [
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KKRYSRLQLLLL
Receptor-Ligand Complex Structure
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PDB
4bea
Rational Optimization of Conformational Effects Induced by Hydrocarbon Staples in Peptides and Their Binding Interfaces.
Resolution
2.57 Å
Binding residue
(original residue number in PDB)
H37 P38 Q40 W73 E132 L135 G139
Binding residue
(residue number reindexed from 1)
H7 P8 Q10 W43 E102 L105 G109
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000339
RNA cap binding
GO:0000340
RNA 7-methylguanosine cap binding
GO:0003723
RNA binding
GO:0003743
translation initiation factor activity
GO:0005515
protein binding
GO:0019899
enzyme binding
GO:0031370
eukaryotic initiation factor 4G binding
GO:0098808
mRNA cap binding
GO:0140297
DNA-binding transcription factor binding
Biological Process
GO:0000082
G1/S transition of mitotic cell cycle
GO:0001662
behavioral fear response
GO:0006406
mRNA export from nucleus
GO:0006412
translation
GO:0006413
translational initiation
GO:0006417
regulation of translation
GO:0010507
negative regulation of autophagy
GO:0017148
negative regulation of translation
GO:0019827
stem cell population maintenance
GO:0030182
neuron differentiation
GO:0045665
negative regulation of neuron differentiation
GO:0045931
positive regulation of mitotic cell cycle
GO:0051028
mRNA transport
GO:0051168
nuclear export
GO:0071549
cellular response to dexamethasone stimulus
GO:0099578
regulation of translation at postsynapse, modulating synaptic transmission
Cellular Component
GO:0000932
P-body
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0010494
cytoplasmic stress granule
GO:0016281
eukaryotic translation initiation factor 4F complex
GO:0016442
RISC complex
GO:0016604
nuclear body
GO:0016607
nuclear speck
GO:0033391
chromatoid body
GO:0036464
cytoplasmic ribonucleoprotein granule
GO:0048471
perinuclear region of cytoplasm
GO:0070062
extracellular exosome
GO:0098794
postsynapse
GO:0098978
glutamatergic synapse
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4bea
,
PDBe:4bea
,
PDBj:4bea
PDBsum
4bea
PubMed
24336354
UniProt
P06730
|IF4E_HUMAN Eukaryotic translation initiation factor 4E (Gene Name=EIF4E)
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