Structure of PDB 4bac Chain A Binding Site BS01
Receptor Information
>4bac Chain A (length=368) Species:
11963
(Human spumaretrovirus) [
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LDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKIIPPQSDRQKI
VLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNK
ASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYP
TKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLE
FSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTY
SPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRTSLYHPST
PPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDH
LGNNRTVSIDNLKPTSHQ
Ligand information
>4bac Chain C (length=19) [
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attgtcatggaattttgta
Receptor-Ligand Complex Structure
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PDB
4bac
Assembly of Prototype Foamy Virus Strand Transfer Complexes on Product DNA Bypassing Catalysis of Integration.
Resolution
3.263 Å
Binding residue
(original residue number in PDB)
I112 L113 R114 P115 E207 F208 S209 T210 Q215 S216 S218 R222 R229 S258 P259 L347 N348 R350 T351
Binding residue
(residue number reindexed from 1)
I105 L106 R107 P108 E200 F201 S202 T203 Q208 S209 S211 R215 R222 S251 P252 L340 N341 R343 T344
Enzymatic activity
Enzyme Commision number
2.7.7.-
2.7.7.49
: RNA-directed DNA polymerase.
2.7.7.7
: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4
: ribonuclease H.
3.4.23.-
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
Biological Process
GO:0015074
DNA integration
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Molecular Function
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Biological Process
External links
PDB
RCSB:4bac
,
PDBe:4bac
,
PDBj:4bac
PDBsum
4bac
PubMed
23011895
UniProt
P14350
|POL_FOAMV Pro-Pol polyprotein (Gene Name=pol)
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