Structure of PDB 4aan Chain A Binding Site BS01
Receptor Information
>4aan Chain A (length=323) Species:
243231
(Geobacter sulfurreducens PCA) [
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DVMKRAQGLFKPIPAKPPVMKDNPASPSRVELGRMLFFDPRLSASHLISC
NTCHNVGLGGTDILETSIGHGWQKGPRNSPTVLNAVYNIAQFWDGRAEDL
AAQAKGPVQASVEMNNKPENLVATLKSIPGYPPLFRKAFPGQGDPVTFDN
VAKAIEVFEATLVTPDAPFDKYLKGNRKAISSTAEQGLALFLDKGCAACH
SGVNMGGTGYFPFGVREDPGPVVRPVDDTGRYKVTSTAADKYVFRSPSLR
NVAITMPYFHSGKVWKLKDAVKIMGSAQLGISITDADADKIVTFLNTLTG
AQPKVMHPVLPPNSDDTPRPVSN
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
4aan Chain A Residue 400 [
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Receptor-Ligand Complex Structure
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PDB
4aan
Maca is a Second Cytochrome C Peroxidase of Geobacter Sulfurreducens.
Resolution
1.22 Å
Binding residue
(original residue number in PDB)
C73 C76 H77 S90 R100 S102 P103 Q114 F115 W116 R119 Q126 P130 E182 R268
Binding residue
(residue number reindexed from 1)
C50 C53 H54 S67 R77 S79 P80 Q91 F92 W93 R96 Q103 P107 E159 R245
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
E136
Catalytic site (residue number reindexed from 1)
E113
Enzyme Commision number
1.11.1.5
: cytochrome-c peroxidase.
Gene Ontology
Molecular Function
GO:0004130
cytochrome-c peroxidase activity
GO:0004601
peroxidase activity
GO:0009055
electron transfer activity
GO:0016491
oxidoreductase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0042597
periplasmic space
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4aan
,
PDBe:4aan
,
PDBj:4aan
PDBsum
4aan
PubMed
22417533
UniProt
Q74FY6
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