Structure of PDB 3x35 Chain A Binding Site BS01
Receptor Information
>3x35 Chain A (length=87) Species:
9823
(Sus scrofa) [
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AVKYYTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGG
DATENFEDVGHSTDARELSKTFIIGELHPDDRSKIAK
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
3x35 Chain A Residue 101 [
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Receptor-Ligand Complex Structure
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PDB
3x35
High-resolution crystal structures of the solubilized domain of porcine cytochrome b5.
Resolution
0.95 Å
Binding residue
(original residue number in PDB)
F40 H44 P45 G46 V50 L51 F63 V66 H68 S69 A72 S76
Binding residue
(residue number reindexed from 1)
F33 H37 P38 G39 V43 L44 F56 V59 H61 S62 A65 S69
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0020037
heme binding
View graph for
Molecular Function
External links
PDB
RCSB:3x35
,
PDBe:3x35
,
PDBj:3x35
PDBsum
3x35
PubMed
26143928
UniProt
P00172
|CYB5_PIG Cytochrome b5 (Gene Name=CYB5A)
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