Structure of PDB 3wwx Chain A Binding Site BS01
Receptor Information
>3wwx Chain A (length=340) Species:
690348
(Streptomyces sp. 82F2) [
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PDHAATQQALEAAVADGVPGAVAQARDGRDRWTGTAGERGGDDRYRVGSI
TKTFTATVLLQLQAEGRIDLDDPVEKWLPGVVRGNGHDGRKITVRQLLNH
TSGIYSYTEDPAFQAKVFGPGFLEHRYDTWTPKQLVAVAMAHEPDFTPGA
SWNYSNTNFVLAGMVIEKVTGRPYGKAVENRIIKPLKLRATTVPGTRSAM
PEPSSPAYSKLSRNAPVHDVSTLNPSIAGAAGEMISDSRDLQTFYRALLQ
GRLLPKSALNEMTTTVQISPEYPNVGYGLGLMKDKLSCGVEVWGHGGGIH
GSSSLAQVTRDGGHSLAGNFNADWAGDSQKVIEAEFCGTA
Ligand information
Ligand ID
DIA
InChI
InChI=1S/C8H20N2/c9-7-5-3-1-2-4-6-8-10/h1-10H2
InChIKey
PWGJDPKCLMLPJW-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C(CCCCN)CCCN
ACDLabs 10.04
CACTVS 3.341
NCCCCCCCCN
Formula
C8 H20 N2
Name
OCTANE 1,8-DIAMINE;
1,8-DIAMINOOCTANE;
OCTAMETHYLENEDIAMINE;
1,8-OCTANEDIAMINE
ChEMBL
CHEMBL29392
DrugBank
DB04333
ZINC
ZINC000001677582
PDB chain
3wwx Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
3wwx
Crystal structure of D-stereospecific amidohydrolase from Streptomyces sp. 82F2 - insight into the structural factors for substrate specificity.
Resolution
1.49 Å
Binding residue
(original residue number in PDB)
F155 L248 G337 I338 H339 D362
Binding residue
(residue number reindexed from 1)
F118 L211 G298 I299 H300 D323
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
S86 K89 S143 T145 H162 Y191 V197 S260 G340
Catalytic site (residue number reindexed from 1)
S49 K52 S106 T108 H125 Y154 V160 S221 G301
Enzyme Commision number
?
External links
PDB
RCSB:3wwx
,
PDBe:3wwx
,
PDBj:3wwx
PDBsum
3wwx
PubMed
26513520
UniProt
E2RVJ1
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