Structure of PDB 3wad Chain A Binding Site BS01

Receptor Information

>3wad Chain A (length=398) Species: 1944 (Streptomyces halstedii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MRVLMTVFANRSHLYNMVPLAWALTTAGHEVHIASHPDNVQAISDSGLTA
VPVGNDLNIMAALTLNETRPEKLTWQYIHDVFAQYSQIYEYMADSTMTAD
LVAHARQWQPDLVIWDALTYAGPIAAEAVGAPHVRMLFGLDQWGRMRDHF
NRLTGERAADDRHDPLADWLATKGEPHGVAFTESLVTGTTTLAVAPPWMS
FPSEQPALSMRHLPFNGPAVLPDWLREAPSRPRVCLTLGLTLRELNVTLA
DFVNAVADIDADVVATFSAEQVAEIGDLPDNVRAVDFVPLHALLPSCAAI
VHHGGGGTRTNAIRYGVPQLIVPNWLWDEGYVAERFAERGAALVTEVPDL
TPDRLRDQLRRLIAEPSFKAAAEQIQKEYDALPSLTETVGELVRVAER

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

3wad Chain A Residue 500 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3wad Crystal Structure of Glycosyltransferase Vinc Involved in the Biosynthesis of Vicenistatin
Resolution	2.0 Å
Binding residue (original residue number in PDB)	E351 E355
Binding residue (residue number reindexed from 1)	E334 E338
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0008194	UDP-glycosyltransferase activity
GO:0016740	transferase activity
GO:0016757	glycosyltransferase activity
GO:0016758	hexosyltransferase activity
GO:0046872	metal ion binding

	Biological Process
GO:0017000	antibiotic biosynthetic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:3wad, PDBe:3wad, PDBj:3wad
PDBsum	3wad
PubMed
UniProt	Q76KZ6

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