Structure of PDB 3w9k Chain A Binding Site BS01
Receptor Information
>3w9k Chain A (length=135) Species:
273063
(Sulfurisphaera tokodaii str. 7) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MKVEKEIKTNQDIDVVMTIFSDPAFTIPQIFPGIASIKCIEPEIFEAEGK
FLAFSYKVKGRVYKGVDEVRIIYDSDRGNGILYIRKKDNNTLQIILEHDN
KLTAFLGKPYVSSNLDRLAENIDEIIRLERIKRKI
Ligand information
Ligand ID
MYR
InChI
InChI=1S/C14H28O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14(15)16/h2-13H2,1H3,(H,15,16)
InChIKey
TUNFSRHWOTWDNC-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
CCCCCCCCCCCCCC(O)=O
OpenEye OEToolkits 1.7.6
CCCCCCCCCCCCCC(=O)O
ACDLabs 12.01
O=C(O)CCCCCCCCCCCCC
Formula
C14 H28 O2
Name
MYRISTIC ACID
ChEMBL
CHEMBL111077
DrugBank
DB08231
ZINC
ZINC000001530417
PDB chain
3w9k Chain A Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3w9k
A thermoacidophile-specific protein family, DUF3211, functions as a fatty acid carrier with novel binding mode.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
F32 Y57 T104 A105 K109
Binding residue
(residue number reindexed from 1)
F31 Y56 T103 A104 K108
Annotation score
4
Binding affinity
MOAD
: Kd=0.48uM
PDBbind-CN
: -logKd/Ki=6.32,Kd=0.48uM
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3w9k
,
PDBe:3w9k
,
PDBj:3w9k
PDBsum
3w9k
PubMed
23836863
UniProt
Q973T5
[
Back to BioLiP
]