Structure of PDB 3vyb Chain A Binding Site BS01
Receptor Information
>3vyb Chain A (length=63) Species:
10090
(Mus musculus) [
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PVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGET
FLKPEDFNFTVLP
Ligand information
>3vyb Chain B (length=14) [
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gtcactaccggaca
Receptor-Ligand Complex Structure
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PDB
3vyb
Structural basis of the versatile DNA recognition ability of the methyl-CpG binding domain of methyl-CpG binding domain protein 4
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
R106 S107 K108 R109
Binding residue
(residue number reindexed from 1)
R35 S36 K37 R38
Binding affinity
PDBbind-CN
: Kd=162nM
Enzymatic activity
Enzyme Commision number
3.2.2.-
Gene Ontology
Molecular Function
GO:0003677
DNA binding
View graph for
Molecular Function
External links
PDB
RCSB:3vyb
,
PDBe:3vyb
,
PDBj:3vyb
PDBsum
3vyb
PubMed
23316048
UniProt
Q9Z2D7
|MBD4_MOUSE Methyl-CpG-binding domain protein 4 (Gene Name=Mbd4)
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