Structure of PDB 3vca Chain A Binding Site BS01
Receptor Information
>3vca Chain A (length=397) Species:
266834
(Sinorhizobium meliloti 1021) [
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TSIHQRLDRRLSGFSLEQPFYTSPEVYALDLQHIFYKQWLYAVPVCQLAK
AGSYTTLRVGAYEVVIVRSRDGEVRAFHNSCRHRGSLICKARQGQVAKLV
CPYHQWTYELDGKLIWANDMGPDFDASKYGLKPVNLRNLDGLIYICLSDT
PPDFQTFAQLARPYLEVHDLKDAKVAFTSTIIEKGNWKLVWENNRECYHC
SSNHPALCRSFPLDPEVAGVGVSKKLQAHFDRCEAAGTPAQFVLAGDGQY
RLARMPLQEKALSYTMDGKAAVSRHLGRVAPPDAGTLLMFHYPSTWNHFL
PDHSLTFRVMPISPTETEVTTTWLVHKDAVEGVDYDLKRLTEVWIATNDE
DREIVETNQQGILSPAYVPGPYSPGQESGVMQFVDWYAASLERALAP
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
3vca Chain A Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
3vca
Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV-Visible Spectroscopic Analysis of a Rieske-Type Demethylase.
Resolution
1.59 Å
Binding residue
(original residue number in PDB)
C86 H88 R89 C106 Y108 H109 W111
Binding residue
(residue number reindexed from 1)
C81 H83 R84 C101 Y103 H104 W106
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
H109 E201 H204 H209 N357
Catalytic site (residue number reindexed from 1)
H104 E196 H199 H204 N348
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
GO:0051537
2 iron, 2 sulfur cluster binding
Biological Process
GO:0044237
cellular metabolic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:3vca
,
PDBe:3vca
,
PDBj:3vca
PDBsum
3vca
PubMed
22224443
UniProt
Q92ZP9
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