Structure of PDB 3ukg Chain A Binding Site BS01
Receptor Information
>3ukg Chain A (length=223) Species:
559292
(Saccharomyces cerevisiae S288C) [
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KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRV
YLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSIKRKFSADEDYTLAI
AVKKQFYRDLFQIDPDTGRSPNHVPGSEPNFAAYRTQSRRGPIAREFFKH
FAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAEKAQNREPEPMKNLT
NRPKRPGVPTPGNYNSAAKRARN
Ligand information
>3ukg Chain C (length=31) [
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gaacaccacacaacacccacacaccaggtgt
Receptor-Ligand Complex Structure
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PDB
3ukg
The orientation of the C-terminal domain of the Saccharomyces cerevisiae Rap1 protein is determined by its binding to DNA.
Resolution
2.95 Å
Binding residue
(original residue number in PDB)
K360 A361 S362 F363 H385 H398 T399 N401 S402 H405 R406 Y410 K446 R447 F449 H536 T537 N539 D543 R544 F548 N576 T578 T588 P589 G590 N591 N593 S594
Binding residue
(residue number reindexed from 1)
K1 A2 S3 F4 H26 H39 T40 N42 S43 H46 R47 Y51 K87 R88 F90 H158 T159 N161 D165 R166 F170 N198 T200 T210 P211 G212 N213 N215 S216
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0000723
telomere maintenance
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Molecular Function
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Biological Process
External links
PDB
RCSB:3ukg
,
PDBe:3ukg
,
PDBj:3ukg
PDBsum
3ukg
PubMed
22139930
UniProt
P11938
|RAP1_YEAST DNA-binding protein RAP1 (Gene Name=RAP1)
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