Structure of PDB 3ub9 Chain A Binding Site BS01
Receptor Information
>3ub9 Chain A (length=162) Species:
102617
(Helicobacter pylori SS1) [
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AQLMEHLETGQYKKREKTLAYMTKILEQGIHEYYKSFDNDTARKMALDYF
KRINDDKGMIYMVVVDKNGVVLFDPVNPKTVGQSGLDAQSVDGVYYVRGY
LEAAKKGGGYTYYKMPKYDGGVPEKKFAYSHYDEVSQMVIAATSYYTDIN
TENKAIKEGVNK
Ligand information
Ligand ID
NHY
InChI
InChI=1S/CH4N2O2/c2-1(4)3-5/h5H,(H3,2,3,4)
InChIKey
VSNHCAURESNICA-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)NO
OpenEye OEToolkits 1.5.0
C(=O)(N)NO
ACDLabs 10.04
O=C(N)NO
Formula
C H4 N2 O2
Name
N-HYDROXYUREA;
1-HYDROXYUREA
ChEMBL
CHEMBL467
DrugBank
DB01005
ZINC
ZINC000008034120
PDB chain
3ub9 Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
3ub9
Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Resolution
1.42 Å
Binding residue
(original residue number in PDB)
V103 D114 V116 Y136 Y153 M155 K166
Binding residue
(residue number reindexed from 1)
V63 D74 V76 Y96 Y113 M115 K126
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3ub9
,
PDBe:3ub9
,
PDBj:3ub9
PDBsum
3ub9
PubMed
22705207
UniProt
B6JPK4
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