Structure of PDB 3tdi Chain A Binding Site BS01

Receptor Information
>3tdi Chain A (length=202) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSVYPKELTQVFEHYINNNLFDIDSLVKFIEELGYNLEDLATLCLAHLLG
YKKLEEPLKREDFLSTWFMQGCSTISDMQECIKTLDVKLHEDLQYFTQIY
NYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDLLEAWFRFLRD
EGKTTISKDTWRMLLLFFKRYPTIQKIISDYDETAAWPFIIDEFYECLQD
QQ
Ligand information
>3tdi Chain D (length=12) Species: 559292 (Saccharomyces cerevisiae S288C) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
MLKLRQLQKKKQ
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3tdi N-terminal acetylation acts as an avidity enhancer within an interconnected multiprotein complex.
Resolution2.3 Å
Binding residue
(original residue number in PDB)
I90 L93 V94 L104 E105 T109 L110 L173 I174 E186 Y190
Binding residue
(residue number reindexed from 1)
I23 L26 V27 L37 E38 T42 L43 L106 I107 E119 Y123
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:3tdi, PDBe:3tdi, PDBj:3tdi
PDBsum3tdi
PubMed21940857
UniProtQ12395|DCN1_YEAST Defective in cullin neddylation protein 1 (Gene Name=DCN1)

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