Structure of PDB 3spv Chain A Binding Site BS01

Receptor Information
>3spv Chain A (length=276) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAP
WIEQEGPEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYG
CDVGPDGRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAA
RVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRWEP
Ligand information
>3spv Chain C (length=8) Species: 10377 (Human herpesvirus 4 strain B95-8) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
RAKFKQLL
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3spv Crystal structure of a peptide-HLA complex
Resolution1.3 Å
Binding residue
(original residue number in PDB)		Y7 D9 R62 N63 I66 N70 T73 D74 E76 S77 N80 Y84 S97 Y99 Y123 T143 K146 W147 V152 Q155 D156 Y159 T163 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 D9 R62 N63 I66 N70 T73 D74 E76 S77 N80 Y84 S97 Y99 Y123 T143 K146 W147 V152 Q155 D156 Y159 T163 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:3spv, PDBe:3spv, PDBj:3spv
PDBsum3spv
PubMed
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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