Structure of PDB 3so7 Chain A Binding Site BS01

Receptor Information

>3so7 Chain A (length=329) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TGDLINTVRGPIPVSEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEK
AVRGLRHARAAGVQTIVDVSTFDIGRDVRLLAEVSRAADVHIVAATGLWF
DPPLSMRMRSVEELTQFFLREIQHGIEDTGIRAGIIKVATTGKATPFQEL
VLKAAARASLATGVPVTTHTSASQRDGEQQAAIFESEGLSPSRVCIGHSD
DTDDLSYLTGLAARGYLVGLDRMPYSAIGLEGNASALALFGTRSWQTRAL
LIKALIDRGYKDRILVSHDWLFGFSSYVTNIMDVMDRINPDGMAFVPLRV
IPFLREKGVPPETLAGVTVANPARFLSPT

Ligand information

Ligand ID

InChI

InChI=1S/Co/q+2

InChIKey

XLJKHNWPARRRJB-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Co+2]
CACTVS 3.341	[Co++]

Formula

Name

COBALT (II) ION

PDB chain

3so7 Chain A Residue 800 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3so7 Phosphate-bound structure of an organophosphate-degrading enzyme from Agrobacterium radiobacter.
Resolution	2.2 Å
Binding residue (original residue number in PDB)	H55 H57 K169 D301
Binding residue (residue number reindexed from 1)	H23 H25 K137 D269
Annotation score	3

Enzymatic activity

Catalytic site (original residue number in PDB)	H55 H57 K169 H201 H230 D233 R254 D301
Catalytic site (residue number reindexed from 1)	H23 H25 K137 H169 H198 D201 R222 D269
Enzyme Commision number	?

Gene Ontology

	Molecular Function
GO:0008270	zinc ion binding
GO:0016788	hydrolase activity, acting on ester bonds
GO:0046872	metal ion binding

	Biological Process
GO:0009056	catabolic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:3so7, PDBe:3so7, PDBj:3so7
PDBsum	3so7
PubMed	22112835
UniProt	Q93LD7

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