Structure of PDB 3skm Chain A Binding Site BS01
Receptor Information
>3skm Chain A (length=270) Species:
9606
(Homo sapiens) [
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GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAARAPWIEQEG
PEYWDRNTQIFKTNTQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGPD
GRLLRGHNQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQD
RAYLEGTCVEWLRRYLENGKDTLERADPPKTHVTHHPISDHEATLRCWAL
GFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQR
YTCHVQHEGLPKPLTLRWEP
Ligand information
>3skm Chain C (length=9) Species:
10376
(human gammaherpesvirus 4) [
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FLRGRAYVL
Receptor-Ligand Complex Structure
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PDB
3skm
A structural basis for varied alpha-beta TCR usage against an immunodominant EBV antigen restricted to a HLA-B8 molecule.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
Y7 F36 N63 I66 N70 T73 S77 N80 Y84 Y99 N114 Y116 Y123 T143 W147 V152 D156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 F36 N57 I60 N64 T67 S71 N74 Y78 Y93 N108 Y110 Y117 T137 W141 V146 D150 Y153 W161 Y165
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3skm
,
PDBe:3skm
,
PDBj:3skm
PDBsum
3skm
PubMed
22140258
UniProt
P01889
|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)
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