Structure of PDB 3sdp Chain A Binding Site BS01

Receptor Information
>3sdp Chain A (length=186) Species: 303 (Pseudomonas putida) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGTPEFEGKTLE
EIVKSSSGGIFNNAAQVWNHTFYWNCLSPDAGGQPTGALADAINAAFGSF
DKFKEEFTKTSVGTFGSGWAWLVKADGSLALCSTIGAGAPLTSGDTPLLT
CDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEEG
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain3sdp Chain A Residue 196 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3sdp The 2.1-A resolution structure of iron superoxide dismutase from Pseudomonas ovalis.
Resolution2.1 Å
Binding residue
(original residue number in PDB)
H26 H74 D156 H160
Binding residue
(residue number reindexed from 1)
H22 H70 D152 H156
Annotation score1
Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0004784 superoxide dismutase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3sdp, PDBe:3sdp, PDBj:3sdp
PDBsum3sdp
PubMed2271564
UniProtP09223|SODF_PSEPU Superoxide dismutase [Fe] (Gene Name=sodB)

[Back to BioLiP]