Structure of PDB 3rya Chain A Binding Site BS01

Receptor Information
>3rya Chain A (length=559) Species: 416870 (Lactococcus cremoris subsp. cremoris MG1363) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GNFDVAYQNPDKAIKGGNLKVAYQSDSPMKAQWLSGLSNDATFATMSGPG
GGQDGLFFTDSGFKFIKGGAADVALDKESKTATITLRKDLKWSDGSEVTA
KDYEFTYETIANPAYGSDRWTDSLANIVGLSDYHTGKAKTISGITFPDGE
NGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPKTTT
KPLVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKSVAA
LSSSKYDIINGMVSSQYKQVKNLKGYKVLGQQAMYISLMYYNLGHYDAKN
SINVQDRKTPLQDQNVRQAIGYARNVAEVDNKFSNGLSTPANSLIPPIFK
QFTSSSVKGYEKQDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAAR
VGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMTTPPGANDW
DITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKSENP
TYRKAAFVKYQEDMNKKAYVIPTNFMLNYTPVNKRVVGMTLDYGAMNTWS
EIGVSSAKL
Ligand information
Receptor-Ligand Complex Structure
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PDB3rya Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		N55 D56 A57 R135 G277 V279 M300 Y301 S303 R416 F450 S472 W473 S474 A476 S477
Binding residue
(residue number reindexed from 1)		N39 D40 A41 R119 G261 V263 M284 Y285 S287 R400 F434 S456 W457 S458 A460 S461
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015833 peptide transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3rya, PDBe:3rya, PDBj:3rya
PDBsum3rya
PubMed21665971
UniProtA2RJ53

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