Structure of PDB 3q0r Chain A Binding Site BS01
Receptor Information
>3q0r Chain A (length=343) Species:
9606
(Homo sapiens) [
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GRSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAE
RQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLP
LALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQ
KCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPI
LEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQH
KFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVV
QKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYY
Ligand information
>3q0r Chain B (length=8) [
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uguagaua
........
Receptor-Ligand Complex Structure
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PDB
3q0r
Alternate modes of cognate RNA recognition by human PUMILIO proteins.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
Q738 R742 Q745 N777 Y778 Q781 Y811 C813 R814 Q817 Q848 N849 H852 Q855 Y885 C887 R888 Q891 Y921 N923 Y924 Q927 S959 N960 E963 Y1000 N1002 Y1003 Q1006 Y1036 H1039
Binding residue
(residue number reindexed from 1)
Q33 R37 Q40 N72 Y73 Q76 Y106 C108 R109 Q112 Q143 N144 H147 Q150 Y180 C182 R183 Q186 Y216 N218 Y219 Q222 S254 N255 E258 Y295 N297 Y298 Q301 Y331 H334
Binding affinity
PDBbind-CN
: Kd=0.08nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
View graph for
Molecular Function
External links
PDB
RCSB:3q0r
,
PDBe:3q0r
,
PDBj:3q0r
PDBsum
3q0r
PubMed
21397187
UniProt
Q8TB72
|PUM2_HUMAN Pumilio homolog 2 (Gene Name=PUM2)
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