Structure of PDB 3pmk Chain A Binding Site BS01

Receptor Information
>3pmk Chain A (length=404) Species: 582817 (Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GAMEDPVEYPADYFRKSKEIPLYINTTKSLSDLRGYVYQGLKSGNVSIIH
VNSYLYGALKDIRGKLDKDWSSFGINIGKAGDTIGIFDLVSLKALDGVLP
DGVSDASRTSADDKWLPLYLLGLYRVGRTQMPEYRKKLMDGLTNQCKMIN
EQFEPLVPEGRDIFDVWGNDSNYTKIVAAVDMFFHMFKKHECASFRYGTI
VSRFKDCAALATFGHLCKITGMSTEDVTTWILNREVADEMVQMMLPGQEI
DKADSYMPYLIDFGLSSKSPYSSVKNPAFHFWGQLTALLLRSTRARNARQ
PDDIEYTSLTTAGLLYAYAVGSSADLAQQFCVGDNKYTPDDSTGGLTTNA
PPQGRDVVEWLGWFEDQNRKPTPDMMQYAKRAVMSLQGLREKTIGKYAKS
EFDK
Ligand information
>3pmk Chain O (length=29) Species: 582817 (Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
TKVREYLKSYSRLDQAVGEIDEIEAQRAE
Receptor-Ligand Complex Structure
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PDB3pmk Structure of the Vesicular Stomatitis Virus N0-P Complex
Resolution3.03 Å
Binding residue
(original residue number in PDB)		Q347 F348 C349 G351
Binding residue
(residue number reindexed from 1)		Q329 F330 C331 G333
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005737 cytoplasm
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:3pmk, PDBe:3pmk, PDBj:3pmk
PDBsum3pmk
PubMed21960769
UniProtB7UCZ2

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