Structure of PDB 3pje Chain A Binding Site BS01
Receptor Information
>3pje Chain A (length=257) Species:
83333
(Escherichia coli K-12) [
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GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF
AAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSISFAPGDQLD
GDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER
AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK
DFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF
SIAAMNE
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
3pje Chain A Residue 701 [
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Receptor-Ligand Complex Structure
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PDB
3pje
Structural basis of triclosan resistance
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
G13 S19 I20 Q40 D64 V65 S91 I92 S93 L144 S145 K163 A189 G190 P191 I192 T194 A196
Binding residue
(residue number reindexed from 1)
G12 S18 I19 Q39 D63 V64 S90 I91 S92 L143 S144 K162 A188 G189 P190 I191 T193 A195
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
S145 Y156 M159 K163 I200
Catalytic site (residue number reindexed from 1)
S144 Y155 M158 K162 I199
Enzyme Commision number
1.3.1.9
: enoyl-[acyl-carrier-protein] reductase (NADH).
Gene Ontology
Molecular Function
GO:0004318
enoyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0005515
protein binding
GO:0016491
oxidoreductase activity
GO:0042802
identical protein binding
GO:0070404
NADH binding
Biological Process
GO:0006633
fatty acid biosynthetic process
GO:0008610
lipid biosynthetic process
GO:0009102
biotin biosynthetic process
GO:0030497
fatty acid elongation
GO:0046677
response to antibiotic
GO:0051289
protein homotetramerization
Cellular Component
GO:0005829
cytosol
GO:0016020
membrane
GO:0032991
protein-containing complex
GO:1902494
catalytic complex
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3pje
,
PDBe:3pje
,
PDBj:3pje
PDBsum
3pje
PubMed
21094257
UniProt
P0AEK4
|FABI_ECOLI Enoyl-[acyl-carrier-protein] reductase [NADH] FabI (Gene Name=fabI)
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