Structure of PDB 3pe7 Chain A Binding Site BS01

Receptor Information

>3pe7 Chain A (length=376) Species: 393305 (Yersinia enterocolitica subsp. enterocolitica 8081) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MAKGKQIPLTFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKL
LFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD
GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWV
PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD
STVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGS
ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGD
GSDAENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDD
KQILFTSDVHGKPALYLATLPESVWK

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

3pe7 Chain A Residue 389 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3pe7 The active site of oligogalacturonate lyase provides unique insights into cytoplasmic oligogalacturonate beta-elimination.
Resolution	1.65 Å
Binding residue (original residue number in PDB)	H287 Q350 H353 H355
Binding residue (residue number reindexed from 1)	H287 Q338 H341 H343
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0016829	lyase activity
GO:0046872	metal ion binding
GO:0047487	oligogalacturonide lyase activity

	Biological Process
GO:0045490	pectin catabolic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:3pe7, PDBe:3pe7, PDBj:3pe7
PDBsum	3pe7
PubMed	20851883
UniProt	A1JMA5

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