Structure of PDB 3osp Chain A Binding Site BS01
Receptor Information
>3osp Chain A (length=428) Species:
4932
(Saccharomyces cerevisiae) [
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KRIVACDDPDFLTSYFAHSRLHHLSAWKANLKDKFLNENIHKYTKITDKD
TYIIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCN
YVARSYGIKNGMWVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKR
LNIFNLILPISIDEAVCVRIIPDTLNARLCEEIRQEIFQGTNGCTVSIGC
SDSLVLARLALKMAKPNGYNITFKSNLSEEFWSSFKLDDLPGVGHSTLSR
LESTFDSPHSLNDLRKRYTLDALKASVGSKLGMKIHLALQGQDDEESLKI
LYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNEINKT
TSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATE
MKSLYRTLGCPPMELRGLALQFNKLVDV
Ligand information
>3osp Chain T (length=16) [
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taacgtaggggaggat
Receptor-Ligand Complex Structure
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PDB
3osp
DNA synthesis across an abasic lesion by yeast REV1 DNA polymerase.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
I307 Y319 F320 H322 S323 R324 L325 H326 S329 K336 H393 G394 T395 K396 N397 S398 D399 K590 E606 K621 S624 I625 D626 N628 W629 K681 Y682
Binding residue
(residue number reindexed from 1)
I3 Y15 F16 H18 S19 R20 L21 H22 S25 K32 H89 G90 T91 K92 N93 S94 D95 K280 E296 K311 S314 I315 D316 N318 W319 K371 Y372
Enzymatic activity
Enzyme Commision number
2.7.7.-
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3osp
,
PDBe:3osp
,
PDBj:3osp
PDBsum
3osp
PubMed
21167175
UniProt
P12689
|REV1_YEAST DNA repair protein REV1 (Gene Name=REV1)
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