Structure of PDB 3orh Chain A Binding Site BS01

Receptor Information
>3orh Chain A (length=230) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAA
ASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ
THKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHA
FRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN
IRTEVMALVPPADCRYYAFPQMITPLVTKG
Ligand information
Ligand IDSAH
InChIInChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/t6-,7+,9+,10+,13+/m0/s1
InChIKeyZJUKTBDSGOFHSH-WFMPWKQPSA-N
SMILES
SoftwareSMILES
CACTVS 3.341N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O)N
CACTVS 3.341N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O
ACDLabs 10.04O=C(O)C(N)CCSCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O)N
FormulaC14 H20 N6 O5 S
NameS-ADENOSYL-L-HOMOCYSTEINE
ChEMBLCHEMBL418052
DrugBankDB01752
ZINCZINC000004228232
PDB chain3orh Chain A Residue 4000 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3orh The crystal structure of human guanidinoacetate N-methyltransferase with SAH
Resolution1.86 Å
Binding residue
(original residue number in PDB)		W20 V41 M42 M50 G68 G70 M71 I73 A74 E90 C91 L116 W117 D135 T136 L139
Binding residue
(residue number reindexed from 1)		W14 V35 M36 M44 G62 G64 M65 I67 A68 E84 C85 L110 W111 D129 T130 L133
Annotation score5
Enzymatic activity
Enzyme Commision number 2.1.1.2: guanidinoacetate N-methyltransferase.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0008168 methyltransferase activity
GO:0030731 guanidinoacetate N-methyltransferase activity
Biological Process
GO:0006600 creatine metabolic process
GO:0006601 creatine biosynthetic process
GO:0006936 muscle contraction
GO:0007283 spermatogenesis
GO:0009887 animal organ morphogenesis
GO:0032259 methylation
GO:0040014 regulation of multicellular organism growth
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3orh, PDBe:3orh, PDBj:3orh
PDBsum3orh
PubMed
UniProtQ14353|GAMT_HUMAN Guanidinoacetate N-methyltransferase (Gene Name=GAMT)

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