Structure of PDB 3oof Chain A Binding Site BS01
Receptor Information
>3oof Chain A (length=230) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEAFSAEENFLILTEMAT
NHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPS
GHSDLLEARIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILS
PDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRT
FNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
Ligand information
>3oof Chain B (length=12) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
DHQLLRYLLDKD
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3oof
Optimization of a novel class of benzimidazole-based farnesoid X receptor (FXR) agonists to improve physicochemical and ADME properties
Resolution
2.29 Å
Binding residue
(original residue number in PDB)
V303 K307 L324 L468 E471
Binding residue
(residue number reindexed from 1)
V57 K61 L78 L222 E225
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004879
nuclear receptor activity
GO:0032052
bile acid binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0038183
bile acid signaling pathway
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3oof
,
PDBe:3oof
,
PDBj:3oof
PDBsum
3oof
PubMed
21269824
UniProt
Q96RI1
|NR1H4_HUMAN Bile acid receptor (Gene Name=NR1H4)
[
Back to BioLiP
]