Structure of PDB 3omb Chain A Binding Site BS01

Receptor Information
>3omb Chain A (length=503) Species: 391904 (Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TTTADGKPIVTVLVKKNANQEKMANMQWAKDLEADCDCKIEWQEVTREAW
AQQKNATLASGDIADVNLNGYGAVEAYQYPGMFEDLSKDLDKLPNVKAFF
KQKPDAKKMSTDSKGRIYAIADGRGKAYSGTGQHMLINKAWLDKLGLQVP
TTWDELENVLKAFKTQDPNGNGQADEIPMNIKKLEGSYFTWYSPMLLLNS
TGIVTGFNKGVSEYGFYAKNGVVKSFLTSDEYKEVIKYYHKLISEGLIPA
EWATKDDDAYNADQISDGKTAKTGVVFGWSPSDNFGKLKDQYIAMPVPSA
PGVSPDQTVWDGSSSELSPAGLSISSHAANKDAALKLANLLYSEKYSVQQ
FLGSFGKAITKTGEHEYTVDNDKLSQLTGDNQYPGLSELLVGWIPDEATI
KGDTHADELIEVNKVYEEQRSHFDPVKDYIPDYVNMDNMDPSDATKLNTN
NAEIFNTTMQKTATWMSKGGIDEEWDAYCKQLDSIGLQESTKIWQKWYDT
YTK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain3omb Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3omb Crystal structure of extracellular solute-binding protein from Bifidobacterium longum subsp. infantis
Resolution2.1 Å
Binding residue
(original residue number in PDB)
D198 N200 N202 Q204 D206 E207
Binding residue
(residue number reindexed from 1)
D167 N169 N171 Q173 D175 E176
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links