Structure of PDB 3n9l Chain A Binding Site BS01

Receptor Information

>3n9l Chain A (length=486) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PKESDRCGGCGKFTHEDKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEK
FFCPKCVPHTGHSIRYKVVAPHRYRWYSPNEKHLGIEVGSKTWIEDFITR
ENTVPSPTDDEVCIVEDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTM
PKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRPL
LYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQRE
EYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAA
PTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIHA
VLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFEL
LHWMYMRNVLLEKITEANQEGSDMREQEKNIWTASQIMKAEMERWMDREL
RLGPEKNAILPTDDKNKIMISVRKQIEIQTKIQNAK

Ligand information

>3n9l Chain B (length=6) Species: 6239 (Caenorhabditis elegans) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

ARTKQT

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3n9l Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Resolution	2.796 Å
Binding residue (original residue number in PDB)	D196 F239 Q240 W241 I242 G243 C244 D245 Q248 W250 Y266
Binding residue (residue number reindexed from 1)	D5 F21 Q22 W23 I24 G25 C26 D27 Q30 W32 Y48

Enzymatic activity

Enzyme Commision number

1.14.11.-

External links

PDB	RCSB:3n9l, PDBe:3n9l, PDBj:3n9l
PDBsum	3n9l
PubMed	20567261
UniProt	Q9GYI0\|KDM7_CAEEL Lysine-specific demethylase 7 homolog (Gene Name=jmjd-1.2)

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