Structure of PDB 3n97 Chain A Binding Site BS01
Receptor Information
>3n97 Chain A (length=53) Species:
271
(Thermus aquaticus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKL
RHP
Ligand information
>3n97 Chain M (length=22) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tggaaaaaagtacttgacatgg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3n97
The RNA Polymerase alpha Subunit Recognizes the DNA Shape of the Upstream Promoter Element.
Resolution
3.252 Å
Binding residue
(original residue number in PDB)
R379 V407 T408 E410 R411 Q414
Binding residue
(residue number reindexed from 1)
R6 V34 T35 E37 R38 Q41
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006352
DNA-templated transcription initiation
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3n97
,
PDBe:3n97
,
PDBj:3n97
PDBsum
3n97
PubMed
33205945
UniProt
Q9EZJ8
|SIGA_THEAQ RNA polymerase sigma factor SigA (Gene Name=sigA)
[
Back to BioLiP
]