Structure of PDB 3mkg Chain A Binding Site BS01

Receptor Information
>3mkg Chain A (length=124) Species: 4081 (Solanum lycopersicum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYG
DTTNGCMSTGAHFNAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRA
LVVHELEDDAGGRLACGVVGLTPI
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3mkg Chain A Residue 155 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3mkg Biophysical properties of tomato chloroplast sod
Resolution2.2 Å
Binding residue
(original residue number in PDB)		H46 H48 H120
Binding residue
(residue number reindexed from 1)		H45 H47 H104
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) H46 H48 H63 D83 H120 R143
Catalytic site (residue number reindexed from 1) H45 H47 H62 D67 H104 R113
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0005507 copper ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:3mkg, PDBe:3mkg, PDBj:3mkg
PDBsum3mkg
PubMed
UniProtP14831|SODCP_SOLLC Superoxide dismutase [Cu-Zn], chloroplastic (Gene Name=SODCP.2)

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