Structure of PDB 3mfk Chain A Binding Site BS01
Receptor Information
>3mfk Chain A (length=138) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQ
SFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNI
IHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDA
Ligand information
>3mfk Chain C (length=16) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gcaggaagtgcttcct
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3mfk
Structural basis of Ets1 cooperative binding to palindromic sequences on stromelysin-1 promoter DNA.
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
Y386 R391 R394 Y397 K404 R409 Y410
Binding residue
(residue number reindexed from 1)
Y85 R90 R93 Y96 K103 R108 Y109
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0006357
regulation of transcription by RNA polymerase II
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3mfk
,
PDBe:3mfk
,
PDBj:3mfk
PDBsum
3mfk
PubMed
20686355
UniProt
P14921
|ETS1_HUMAN Protein C-ets-1 (Gene Name=ETS1)
[
Back to BioLiP
]