Structure of PDB 3m54 Chain A Binding Site BS01

Receptor Information
>3m54 Chain A (length=245) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMI
EGKLATLMSTEEGRPHFELMPGNSVYHFDKSTSSCISTNALLPDPYESER
VYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGN
TLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIFDMFVHPRFGP
IKCIRTLRAVEADEELTVAYGYDHSPPEAPEWYQVELKAFQATQQ
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3m54 SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
Resolution1.6 Å
Binding residue
(original residue number in PDB)		Y245 D256 R258 W260 N263 T266 L267 S268 D270 F305 K317 Y335 Y337 D338 E348
Binding residue
(residue number reindexed from 1)		Y130 D141 R143 W145 N148 T151 L152 S153 D155 F190 K202 Y220 Y222 D223 E228
Enzymatic activity
Catalytic site (original residue number in PDB) Y245 H293 H297 F305 Y335
Catalytic site (residue number reindexed from 1) Y130 H178 H182 F190 Y220
Enzyme Commision number 2.1.1.364: [histone H3]-lysine(4) N-methyltransferase.
Gene Ontology
Molecular Function
GO:0016279 protein-lysine N-methyltransferase activity
GO:0140945 histone H3K4 monomethyltransferase activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0005694 chromosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3m54, PDBe:3m54, PDBj:3m54
PDBsum3m54
PubMed20675860
UniProtQ8WTS6|SETD7_HUMAN Histone-lysine N-methyltransferase SETD7 (Gene Name=SETD7)

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