Structure of PDB 3m0j Chain A Binding Site BS01

Receptor Information
>3m0j Chain A (length=297) Species: 5116 (Cryphonectria parasitica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DEPFSGAKKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGT
TASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVA
RTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATK
RRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGFRSKEQA
AAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAPAYA
AIRETLVRLRDHGVVGTPDGITPVRLFEVCGLQDAMEVDNGAGGKAF
Ligand information
Ligand IDOAF
InChIInChI=1S/C4H4F2O6/c5-3(6,1(7)8)4(11,12)2(9)10/h11-12H,(H,7,8)(H,9,10)
InChIKeyPNUBNHHFDUCRFW-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04FC(F)(C(=O)O)C(O)(O)C(=O)O
CACTVS 3.341OC(=O)C(O)(O)C(F)(F)C(O)=O
OpenEye OEToolkits 1.5.0C(=O)(C(C(C(=O)O)(F)F)(O)O)O
FormulaC4 H4 F2 O6
Name2,2-difluoro-3,3-dihydroxybutanedioic acid
ChEMBL
DrugBank
ZINC
PDB chain3m0j Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3m0j Structure of oxalacetate acetylhydrolase, a virulence factor of the chestnut blight fungus.
Resolution1.55 Å
Binding residue
(original residue number in PDB)
Y111 T113 G114 A115 D155 G193 R229 E259 N282 S308
Binding residue
(residue number reindexed from 1)
Y44 T46 G47 A48 D88 G126 R162 E192 N215 S241
Annotation score1
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sat Nov 16 14:23:48 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '3m0j', asym_id = 'A', bs = 'BS01', title = 'Structure of oxalacetate acetylhydrolase, a virulence factor of the chestnut blight fungus.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='3m0j', asym_id='A', bs='BS01', title='Structure of oxalacetate acetylhydrolase, a virulence factor of the chestnut blight fungus.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003824', uniprot = '', pdbid = '3m0j', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003824', uniprot='', pdbid='3m0j', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>