Structure of PDB 3lpq Chain A Binding Site BS01
Receptor Information
>3lpq Chain A (length=75) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RFYVKDHRNKAMINLHIQKDNPKIVHAFDMEDLGDKAVYCRCWRSKKFPF
CDGACTKHNEETGDNVGPLIIKKKE
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
3lpq Chain A Residue 500 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3lpq
Mutation of the His ligand in mitoNEET stabilizes the 2Fe-2S cluster despite conformational heterogeneity in the ligand environment.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
C72 R73 C74 C83 D84 A86 C87 P100
Binding residue
(residue number reindexed from 1)
C40 R41 C42 C51 D52 A54 C55 P68
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.6.1.3
: cysteine transaminase.
Gene Ontology
Molecular Function
GO:0051537
2 iron, 2 sulfur cluster binding
Biological Process
GO:0010506
regulation of autophagy
Cellular Component
GO:0043231
intracellular membrane-bounded organelle
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3lpq
,
PDBe:3lpq
,
PDBj:3lpq
PDBsum
3lpq
PubMed
21636891
UniProt
Q9NZ45
|CISD1_HUMAN CDGSH iron-sulfur domain-containing protein 1 (Gene Name=CISD1)
[
Back to BioLiP
]