Structure of PDB 3lfz Chain A Binding Site BS01
Receptor Information
>3lfz Chain A (length=280) Species:
2190
(Methanocaldococcus jannaschii) [
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MFVRVMKIAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVG
IITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIMEENVITLKEN
ADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVI
DDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFI
KLLGSDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMV
TNDIGALPVVDENLRIKGIITEKDVLKYFA
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
3lfz Chain A Residue 281 [
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Receptor-Ligand Complex Structure
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PDB
3lfz
The crystal structure of protein MJ1225 from Methanocaldococcus jannaschii shows strong conservation of key structural features seen in the eukaryal gamma-AMPK.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
R37 I51 T53 M55 D56 E91 V94 I95 V115 G116 R180
Binding residue
(residue number reindexed from 1)
R37 I51 T53 M55 D56 E91 V94 I95 V115 G116 R180
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3lfz
,
PDBe:3lfz
,
PDBj:3lfz
PDBsum
3lfz
PubMed
20382158
UniProt
Q58622
|Y1225_METJA Uncharacterized protein MJ1225 (Gene Name=MJ1225)
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