Structure of PDB 3l87 Chain A Binding Site BS01
Receptor Information
>3l87 Chain A (length=200) Species:
210007
(Streptococcus mutans UA159) [
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MSAIKTITKASHLIDMNDIIREGHPTLRAVAQDVTFPLNEDDIILGEKML
QFLKNSQDPVTAEKMELRGGVGLAAPQLDISKRIIAVLIPNPEDPPKEAY
ALKEVMYNPRIIAHSVQDAALADGEGCLSVDRVVEGYVIRHSRVTIEYYD
KNSDKKKLKLKGYQSIVVQHEIDHTNGIMFFDRINEKNPFEIKEGLLLIE
Ligand information
Ligand ID
FE
InChI
InChI=1S/Fe/q+3
InChIKey
VTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Fe+3]
Formula
Fe
Name
FE (III) ION
ChEMBL
DrugBank
DB13949
ZINC
PDB chain
3l87 Chain A Residue 205 [
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Receptor-Ligand Complex Structure
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PDB
3l87
The Crystal Structure of smu.143c from Streptococcus mutans UA159
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
Q77 A131 H174 H178
Binding residue
(residue number reindexed from 1)
Q77 A127 H170 H174
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
G72 Q77 C131 L132 H174 E175 H178
Catalytic site (residue number reindexed from 1)
G72 Q77 C127 L128 H170 E171 H174
Enzyme Commision number
3.5.1.88
: peptide deformylase.
Gene Ontology
Molecular Function
GO:0016787
hydrolase activity
GO:0042586
peptide deformylase activity
GO:0046872
metal ion binding
Biological Process
GO:0006412
translation
GO:0018206
peptidyl-methionine modification
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Molecular Function
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Biological Process
External links
PDB
RCSB:3l87
,
PDBe:3l87
,
PDBj:3l87
PDBsum
3l87
PubMed
UniProt
Q8DWC2
|DEF_STRMU Peptide deformylase (Gene Name=def)
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