Structure of PDB 3jzv Chain A Binding Site BS01

Receptor Information
>3jzv Chain A (length=148) Species: 269796 (Rhodospirillum rubrum ATCC 11170) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPFRPFQSQYRWPGVDLLAYKEESAPFRSVTRQVLFSGNGLTGELRYFEV
GPGGHSTLERHQHAHGVMILKGRGHAMVGRAVSAVAPYDLVTIPGWSWHQ
FRAPADEALGFLCMVNAERDKPQLPTEADLAMLRADDAVAAFLDGLAG
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain3jzv Chain A Residue 200 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3jzv Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		E67 H69 H73 H107
Binding residue
(residue number reindexed from 1)		E59 H61 H65 H99
Annotation score1
Enzymatic activity
Enzyme Commision number 2.8.4.6: S-methyl-1-thioxylulose 5-phosphate methylthiotransferase.
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016829 lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0009086 methionine biosynthetic process
GO:0019509 L-methionine salvage from methylthioadenosine
GO:0052865 1-deoxy-D-xylulose 5-phosphate biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:3jzv, PDBe:3jzv, PDBj:3jzv
PDBsum3jzv
PubMed
UniProtQ2RSU5|CUPIN_RHORT 1-methylthio-D-xylulose 5-phosphate methylsulfurylase (Gene Name=cupin)

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