Structure of PDB 3jru Chain A Binding Site BS01

Receptor Information
>3jru Chain A (length=490) Species: 64187 (Xanthomonas oryzae pv. oryzae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MALQFTLNQDAPASAAVDCIVVGAFADKTLSPAAQALDSASQGRLTALLA
RGDVAGKTGSTTLLHDLPGVAAPRVLVVGLGDAGKFGVAPYLKAIGDATR
ALKTGAVGTALLTLTELTVKARDAAWNIRQAVTVSDHAAYRYTATLGKKK
VDETGLTTLAIAGDDARALAVGVATAEGVEFARELGNLPPNYCTPAYLAD
TAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNG
GGDARPYVLVGKGITFDTGGVNLKTQGGIEEMKYDMCGGATVIGTFVATV
KAELPINLVVVVPAVENAIDGNAYRPSDVITSMSGKTIEVGNTDAEGRLI
LCDALTYAERFNPEALVDVATLTGACMVALGHQTAGLMSKHDDLANELLA
AGEHVFDRAWRLPLWDEYQGLLDSTFADVYNIGGRWGGAITAGCFLSRFT
ENQRWAHLDIAGVASDEGKRGMATGRPVGLLTQWLLDRAA
Ligand information
Ligand IDCO3
InChIInChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
InChIKeyBVKZGUZCCUSVTD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)([O-])[O-]
ACDLabs 10.04
CACTVS 3.341		[O-]C([O-])=O
FormulaC O3
NameCARBONATE ION
ChEMBL
DrugBankDB14531
ZINC
PDB chain3jru Chain A Residue 491 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3jru Crystal structure of Leucyl Aminopeptidase (pepA) from Xoo0834,Xanthomonas oryzae pv. oryzae KACC10331
Resolution2.6 Å
Binding residue
(original residue number in PDB)		A345 E346 G347 R348 L372
Binding residue
(residue number reindexed from 1)		A345 E346 G347 R348 L372
Annotation score3
Enzymatic activity
Catalytic site (original residue number in PDB) K274 R348
Catalytic site (residue number reindexed from 1) K274 R348
Enzyme Commision number 3.4.11.1: leucyl aminopeptidase.
3.4.11.10: bacterial leucyl aminopeptidase.
Gene Ontology
Molecular Function
GO:0004177 aminopeptidase activity
GO:0008235 metalloexopeptidase activity
GO:0030145 manganese ion binding
GO:0046872 metal ion binding
GO:0070006 metalloaminopeptidase activity
Biological Process
GO:0006508 proteolysis
GO:0019538 protein metabolic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3jru, PDBe:3jru, PDBj:3jru
PDBsum3jru
PubMed
UniProtQ5H4N2|AMPA_XANOR Probable cytosol aminopeptidase (Gene Name=pepA)

[Back to BioLiP]