Structure of PDB 3ibh Chain A Binding Site BS01

Receptor Information
>3ibh Chain A (length=208) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIIYDTPAGPYPARVRIALAEKNMLSSVQFVRINLWKGEHKKPEFLAKNY
SGTVPVLELDDGTLIAECTAITEYIDALDGTPTLTGKTPLEKGVIHMMNK
RAELELLDPVSVYFHHATPGLGPEVELYQNKEWGLRQRDKALHGMHYFDT
VLRERPYVAGDSFSMADITVIAGLIFAAIVKLQVPEECEALRAWYKRMQQ
RPSVKKLL
Ligand information
Ligand IDGSH
InChIInChI=1S/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)/t5-,6-/m0/s1
InChIKeyRWSXRVCMGQZWBV-WDSKDSINSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01O=C(NCC(=O)O)C(NC(=O)CCC(C(=O)O)N)CS
OpenEye OEToolkits 1.7.6C(CC(=O)N[C@@H](CS)C(=O)NCC(=O)O)[C@@H](C(=O)O)N
CACTVS 3.370N[CH](CCC(=O)N[CH](CS)C(=O)NCC(O)=O)C(O)=O
CACTVS 3.370N[C@@H](CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O)C(O)=O
OpenEye OEToolkits 1.7.6C(CC(=O)NC(CS)C(=O)NCC(=O)O)C(C(=O)O)N
FormulaC10 H17 N3 O6 S
NameGLUTATHIONE
ChEMBLCHEMBL1543
DrugBankDB00143
ZINCZINC000003830891
PDB chain3ibh Chain A Residue 234 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3ibh Structures of yeast glutathione-S-transferase Gtt2 reveal a new catalytic type of GST family.
Resolution2.1 Å
Binding residue
(original residue number in PDB)
P28 Y29 H58 T71 V72 E85 C86 H133
Binding residue
(residue number reindexed from 1)
P10 Y11 H40 T53 V54 E67 C68 H115
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) G27
Catalytic site (residue number reindexed from 1) G9
Enzyme Commision number 2.5.1.18: glutathione transferase.
Gene Ontology
Molecular Function
GO:0004364 glutathione transferase activity
GO:0016740 transferase activity
GO:0043295 glutathione binding
Biological Process
GO:0006749 glutathione metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3ibh, PDBe:3ibh, PDBj:3ibh
PDBsum3ibh
PubMed19851333
UniProtQ12390|GST2_YEAST Glutathione S-transferase 2 (Gene Name=GTT2)

[Back to BioLiP]