Structure of PDB 3hdd Chain A Binding Site BS01
Receptor Information
>3hdd Chain A (length=55) Species:
7227
(Drosophila melanogaster) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRA
KIKKS
Ligand information
>3hdd Chain C (length=21) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ttttgccatgtaattacctaa
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3hdd
Engrailed homeodomain-DNA complex at 2.2 A resolution: a detailed view of the interface and comparison with other engrailed structures.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
R5 T6 F8 N51
Binding residue
(residue number reindexed from 1)
R1 T2 F4 N47
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3hdd
,
PDBe:3hdd
,
PDBj:3hdd
PDBsum
3hdd
PubMed
9813123
UniProt
P02836
|HMEN_DROME Segmentation polarity homeobox protein engrailed (Gene Name=en)
[
Back to BioLiP
]