Structure of PDB 3gyv Chain A Binding Site BS01

Receptor Information
>3gyv Chain A (length=187) Species: 36329 (Plasmodium falciparum 3D7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKRREA
LVGAKIGTPNLPEFWLRALRNNNTVSHVIEDHDEEILVYLNDIRCDYGFI
LSFYFATNPFFSNSVLTKTYHMLHTEATVIDWYDNKNILKRDSFFHFFTS
HKEVAQLEMIIEGDYEVALTIKERIIPYAVDYYLGII
Ligand information
Ligand IDIOD
InChIInChI=1S/HI/h1H/p-1
InChIKeyXMBWDFGMSWQBCA-UHFFFAOYSA-M
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[I-]
FormulaI
NameIODIDE ION
ChEMBL
DrugBankDB12754
ZINC
PDB chain3gyv Chain A Residue 3 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3gyv Iodide-SAD, SIR and SIRAS phasing for structure solution of a nucleosome assembly protein.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		K44 K47
Binding residue
(residue number reindexed from 1)		K9 K12
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0005634 nucleus

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3gyv, PDBe:3gyv, PDBj:3gyv
PDBsum3gyv
PubMed19465776
UniProtQ8I608

[Back to BioLiP]