Structure of PDB 3gbo Chain A Binding Site BS01

Receptor Information

>3gbo Chain A (length=200) Species: 98334 (Bothrops moojeni) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

FSPRHIELVVVADHGMFKKYNSNLNTIRKWVHEMVNSMNGFYRSVDVTAS
LANLEVWSKKDLINVQKDSRETLKSFGEWRERDLLPRISHDNAQLLTTIV
FDGHVIGRAFTGGMCDPRHSVGVVMDHSPKNLQVAVTMAHELGHNLGMHH
DGNQCHCDAASCIMADSLSQVLSYEFSDCSQNQYQTYLTKHNPQCILNEP

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

3gbo Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3gbo Structural studies of BmooMPalpha-I, a non-hemorrhagic metalloproteinase from Bothrops moojeni venom.
Resolution	1.77 Å
Binding residue (original residue number in PDB)	E7 D91 C195 N198
Binding residue (residue number reindexed from 1)	E7 D91 C195 N198
Annotation score	4

Enzymatic activity

Enzyme Commision number

3.4.24.-

Gene Ontology

	Molecular Function
GO:0004222	metalloendopeptidase activity
GO:0008237	metallopeptidase activity
GO:0046872	metal ion binding
GO:0090729	toxin activity

	Biological Process
GO:0006508	proteolysis
GO:0035821	modulation of process of another organism

	Cellular Component
GO:0005576	extracellular region
GO:0005886	plasma membrane

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:3gbo, PDBe:3gbo, PDBj:3gbo
PDBsum	3gbo
PubMed	19706302
UniProt	P85314\|VM1BI_BOTMO Snake venom metalloproteinase BmooMPalpha-I

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