Structure of PDB 3g3x Chain A Binding Site BS01
Receptor Information
>3g3x Chain A (length=162) Species:
10665
(Tequatrovirus T4) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAI
GRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALI
NMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVI
CTFRTGTWDAYK
Ligand information
Ligand ID
MTN
InChI
InChI=1S/C10H19NO3S2/c1-9(2)6-8(7-15-16(5,13)14)10(3,4)11(9)12/h6,12H,7H2,1-5H3
InChIKey
MXZPGYFBZHBAQM-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.370
CC1(C)C=C(CS[S](C)(=O)=O)C(C)(C)N1[O]
OpenEye OEToolkits 1.7.2
CC1(C=C(C(N1[O])(C)C)CSS(=O)(=O)C)C
ACDLabs 12.01
ON1C(C=C(CSS(=O)(=O)C)C1(C)C)(C)C
Formula
C10 H18 N O3 S2
Name
S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate;
MTSL
ChEMBL
DrugBank
DB08217
ZINC
ZINC000002569540
PDB chain
3g3x Chain A Residue 801 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3g3x
Structural origin of weakly ordered nitroxide motion in spin-labeled proteins.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
C151 T155
Binding residue
(residue number reindexed from 1)
C151 T155
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
E11 D20
Catalytic site (residue number reindexed from 1)
E11 D20
Enzyme Commision number
3.2.1.17
: lysozyme.
Gene Ontology
Molecular Function
GO:0003796
lysozyme activity
GO:0016798
hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0009253
peptidoglycan catabolic process
GO:0016998
cell wall macromolecule catabolic process
GO:0031640
killing of cells of another organism
GO:0042742
defense response to bacterium
GO:0044659
viral release from host cell by cytolysis
Cellular Component
GO:0030430
host cell cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3g3x
,
PDBe:3g3x
,
PDBj:3g3x
PDBsum
3g3x
PubMed
19384990
UniProt
P00720
|ENLYS_BPT4 Endolysin (Gene Name=E)
[
Back to BioLiP
]