Structure of PDB 3euj Chain A Binding Site BS01
Receptor Information
>3euj Chain A (length=437) Species:
233412
([Haemophilus] ducreyi 35000HP) [
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MIARGKFRSLTLINWNGFFARTFDFDELVTTLSGGNGAGKSTTMAGFVTA
LIPDLTLLNFRNTTEAGSTSSSRDKGLYGKLKAGVCYAVLETVNSRAQRI
ITGVRLQQIAGRDKKVDIRPFSLQNVPMTDSVISLFTEQVANKARVLSLN
DLKEKFEETAVTFKPYHSITDYHSFMFDLGILPKRLRSSSDRNKFYKLIE
ASLYGGISSVITKSLRDYLLPENSGVRQAFQDAESVANILRKTIQREQNR
ILQLNQGLQNIAFGQVKGVRLVVNIRDTHSILLNALSDQSFSEALAMLYK
RIGEELLDYRNYLDLEVETLRGAYGWMRAESSALSTGEAIGTGMSILLMV
VQSWEEESRRMRAKDILPCRLLFLDQAARLDAMSINTLFELCERLDMQLL
IAAPENISPERGTTYKLVRKILANQEYVHVVGLKGFG
Ligand information
Ligand ID
AGS
InChI
InChI=1S/C10H16N5O12P3S/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(25-10)1-24-28(18,19)26-29(20,21)27-30(22,23)31/h2-4,6-7,10,16-17H,1H2,(H,18,19)(H,20,21)(H2,11,12,13)(H2,22,23,31)/t4-,6-,7-,10-/m1/s1
InChIKey
NLTUCYMLOPLUHL-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N
CACTVS 3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[C@@H](O)[C@H]3O
CACTVS 3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[CH](O)[CH]3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N
ACDLabs 12.01
O=P(O)(OP(=S)(O)O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
Formula
C10 H16 N5 O12 P3 S
Name
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER;
ATP-GAMMA-S;
ADENOSINE 5'-(3-THIOTRIPHOSPHATE);
ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE);
ADENOSINE-5'-DIPHOSPHATE MONOTHIOPHOSPHATE
ChEMBL
CHEMBL131890
DrugBank
DB02930
ZINC
ZINC000008295128
PDB chain
3euj Chain A Residue 2001 [
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Receptor-Ligand Complex Structure
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PDB
3euj
Structural studies of a bacterial condensin complex reveal ATP-dependent disruption of intersubunit interactions.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
N67 G68 A69 G70 K71 S72 T73 G107 G110 K111 R1478
Binding residue
(residue number reindexed from 1)
N36 G37 A38 G39 K40 S41 T42 G76 G79 K80 R419
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005524
ATP binding
Biological Process
GO:0007059
chromosome segregation
GO:0030261
chromosome condensation
Cellular Component
GO:0009295
nucleoid
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3euj
,
PDBe:3euj
,
PDBj:3euj
PDBsum
3euj
PubMed
19135891
UniProt
Q7VL96
|MUKB_HAEDU Chromosome partition protein MukB (Gene Name=mukB)
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