Structure of PDB 3eps Chain A Binding Site BS01
Receptor Information
>3eps Chain A (length=566) Species:
83334
(Escherichia coli O157:H7) [
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PRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRI
HLYDHHVGLVVEQLRCITNGQSTDAEFLLRVKEHYTRLLPDYPRFEIAES
FFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWES
LLMRVISDLPLRLHWQNKSRDIHYIIRHLTETLGPENLSKSHLQVANELF
YRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCLTTTAEASIVFG
FARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREY
LVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAA
HVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKI
TDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAA
NIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPPWYSV
SPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVE
DVYAYRRRQRFSVRYG
Ligand information
Ligand ID
AMP
InChI
InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
UDMBCSSLTHHNCD-KQYNXXCUSA-N
SMILES
Software
SMILES
CACTVS 3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
ACDLabs 12.01
O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
Formula
C10 H14 N5 O7 P
Name
ADENOSINE MONOPHOSPHATE
ChEMBL
CHEMBL752
DrugBank
DB00131
ZINC
ZINC000003860156
PDB chain
3eps Chain A Residue 1604 [
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Receptor-Ligand Complex Structure
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PDB
3eps
Structure of the bifunctional isocitrate dehydrogenase kinase/phosphatase.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
N104 S105 H113 K291 K294 T295 Y298 F375 E376 N377
Binding residue
(residue number reindexed from 1)
N103 S104 H112 K290 K293 T294 Y297 F374 E375 N376
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.7.11.5
: [isocitrate dehydrogenase (NADP(+))] kinase.
3.1.3.-
Gene Ontology
Molecular Function
GO:0004674
protein serine/threonine kinase activity
GO:0004721
phosphoprotein phosphatase activity
GO:0005524
ATP binding
GO:0008772
[isocitrate dehydrogenase (NADP+)] kinase activity
GO:0016208
AMP binding
GO:0016788
hydrolase activity, acting on ester bonds
GO:0016791
phosphatase activity
Biological Process
GO:0006006
glucose metabolic process
GO:0006097
glyoxylate cycle
GO:0006099
tricarboxylic acid cycle
GO:0006470
protein dephosphorylation
GO:0016310
phosphorylation
GO:0018105
peptidyl-serine phosphorylation
GO:0050790
regulation of catalytic activity
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3eps
,
PDBe:3eps
,
PDBj:3eps
PDBsum
3eps
PubMed
20505668
UniProt
Q8X607
|ACEK_ECO57 Isocitrate dehydrogenase kinase/phosphatase (Gene Name=aceK)
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