Structure of PDB 3e38 Chain A Binding Site BS01

Receptor Information
>3e38 Chain A (length=342) Species: 435590 (Phocaeicola vulgatus ATCC 8482) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQRRNEIQVPDLDGYTTLKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAI
SLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLIKGSEITRAMAPG
HFNAIFLSDSNPLEQKDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWW
PEHTALYQEGCMHGIEVANGHLYMPEAIQWCLDKNLTMIGTSDIHQPIQT
DYDFEKGEHRTMTFVFAKERSLQGIREALDNRRTAAYFHELLIGREDLLR
PFFEKCVKIEEVSRNEQGVTLSITNVTDLVLKLKKTAHDTLLVYFRDMTL
KPHTRYTVRIGFKQGIKGGDVNFEVTNFIVAPDKGLKYTISL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3e38 Chain A Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3e38 Crystal structure of two-domain protein containing predicted PHP-like metal-dependent phosphoesterase (YP_001300751.1) from Bacteroides vulgatus ATCC 8482 at 2.20 A resolution
Resolution2.2 Å
Binding residue
(original residue number in PDB)		E113 H122 H157
Binding residue
(residue number reindexed from 1)		E92 H101 H136
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004534 5'-3' RNA exonuclease activity
GO:0035312 5'-3' DNA exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006259 DNA metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:3e38, PDBe:3e38, PDBj:3e38
PDBsum3e38
PubMed
UniProtA6L615

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