Structure of PDB 3drj Chain A Binding Site BS01

Receptor Information
>3drj Chain A (length=560) Species: 416870 (Lactococcus cremoris subsp. cremoris MG1363) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LKAGNFDVAYQNPDKAIKGGNLKVAYQSDSPMKAQWLSGLSNDATFATMS
GPGGGQDGLFFTDSGFKFIKGGAADVALDKESKTATITLRKDLKWSDGSE
VTAKDYEFTYETIANPAYGSDRWTDSLANIVGLSDYHTGKAKTISGITFP
DGENGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPK
TTTKPLVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKS
VAALSSSKYDIINGMVSSQYKQVKNLKGYKVLGQQAMYISLMYYNLGHYD
AKNSINVQDRKTPLQDQNVRQAIGYARNVAEVDNKFSNGLSTPANSLIPP
IFKQFTSSSVKGYEKQDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVY
AARVGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMTTPPGA
NDWDITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKS
ENPTYRKAAFVKYQEDMNKKAYVIPTNFMLNYTPVNKRVVGMTLDYGAMN
TWSEIGVSSA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3drj The structural basis for peptide selection by the transport receptor OppA
Resolution1.5 Å
Binding residue
(original residue number in PDB)
Y301 S472 W473 S474 L475 A476 S480 D483
Binding residue
(residue number reindexed from 1)
Y288 S459 W460 S461 L462 A463 S467 D470
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015833 peptide transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3drj, PDBe:3drj, PDBj:3drj
PDBsum3drj
PubMed19300437
UniProtA2RJ53

[Back to BioLiP]