Structure of PDB 3dgt Chain A Binding Site BS01

Receptor Information
>3dgt Chain A (length=278) Species: 67364 (Streptomyces sioyaensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SAPAPPSGWSQVFLDDFDGAAGSSVNTANWQFDTGTSYPGGAGNWGTGEV
ESMTSSTSNVSLDGNGDLLITPRRDASGNWTSGRIETTRTDFQPPAGGKL
RVEARLQMPNVTGDAAAGYWPAFWMLGAPFRGNYQNWPGVGELDIMENVQ
GLNKTWATMHCGTSPGGPCNETSGIGNSTACPNTTCQSGFHTYTMEWDRS
VSPEAIRFSVDGVTYQTVTANQMDAATWTNATNHGFFVILNVAMGGGFPG
AFGGGPTGATEPGHPMVVDYVQVTSLSP
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain3dgt Chain A Residue 800 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3dgt The 1.5 A structure of endo-1,3-beta-glucanase from Streptomyces sioyaensis: evolution of the active-site structure for 1,3-beta-glucan-binding specificity and hydrolysis
Resolution1.5 Å
Binding residue
(original residue number in PDB)
D16 G66 D269
Binding residue
(residue number reindexed from 1)
D16 G66 D269
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.39: glucan endo-1,3-beta-D-glucosidase.
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:3dgt, PDBe:3dgt, PDBj:3dgt
PDBsum3dgt
PubMed18703845
UniProtQ9L816

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