Structure of PDB 3dc6 Chain A Binding Site BS01

Receptor Information
>3dc6 Chain A (length=197) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVS
KGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF
GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTG
LVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKAQQ
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain3dc6 Chain A Residue 198 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3dc6 Purification, crystallization and X-ray structures of the two manganese superoxide dismutases from Caenorhabditis elegans
Resolution1.8 Å
Binding residue
(original residue number in PDB)		H26 H74 D158 H162
Binding residue
(residue number reindexed from 1)		H26 H74 D158 H162
Annotation score1
Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0004784 superoxide dismutase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:3dc6, PDBe:3dc6, PDBj:3dc6
PDBsum3dc6
PubMed19052361
UniProtP31161|SODM1_CAEEL Superoxide dismutase [Mn] 1, mitochondrial (Gene Name=sod-2)

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